BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A07LP1|AL427415
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig723 1608 0.0
>3x_Contig723
Length = 3342
Score = 1608 bits (806), Expect = 0.0
Identities = 837/851 (98%), Gaps = 3/851 (0%)
Strand = Plus / Plus
Query: 1 atcatcagtattggcgcc--ctcgagtcaggtcagtgtgtggttattggcgacaggtttg 58
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 atcatcagtattggcgccagctcgagtcaggtcagtgtgtggttattggcgacaggtttg 2016
Query: 59 aacacaatacgaaacggtgtagatctcgtttttcgggttattttctaattctattttttt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2017 aacacaatacgaaacggtgtagatctcgtttttcgggttattttctaattctattttttt 2076
Query: 119 tcctttaaaactctgtgtgtntntttctattattttttctttcaatcaattgattaaaaa 178
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 2077 tcctttaaaactctgtgtgtgtttttctattattttttctttcaatcaattgattaaaaa 2136
Query: 179 aaaaaattaatattattaaagaaagataattataaaacataagagatttagagacttacg 238
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2137 aaaaaattaatattattaaagaaagataattataaaacataagagattgagagacttacg 2196
Query: 239 ttcatacgaaggttagaaagaatacagcagggtctgtttgtttgtagaaattggaagtka 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2197 ttcatacgaaggttagaaagaatacagcagggtctgtttgtttgtagaaattggaagtga 2256
Query: 299 gacaatattgcatcttcaaaccagggtaatttctactagtacctttttttatcttttaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 gacaatattgcatcttcaaaccagggtaatttctactagtacctttttttatcttttaaa 2316
Query: 359 gttgcgggctatattctataatctgtttgcttcgttaggaaaaamaaataaggattaata 418
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2317 gttgcgggctatattctataatctgtttgcttcgttaggaaaaaaaaataaggattaata 2376
Query: 419 agaaccaatacttttggataatccaagacacggaagcmtcacagttgccatcggttactt 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2377 agaaccaatacttttggataatccaagacacggaagcatcacagttgccatcggttactt 2436
Query: 479 caattattaagaacgtttgatatagtaccgcgataattatmamacamaggaacaaggaat 538
|||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 2437 caattattaagaacgtttgatatagtaccgcgataattataaaacaaaggaacaaggaat 2496
Query: 539 aaaataagaaaaatggatcaacaatcagtagacgttgacgatatcattgatagattgttg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2497 aaaataagaaaaatggatcaacaatcagtagacgttgacgatatcattgatagattgttg 2556
Query: 599 gaagtgagagggttgaaacctggccatcaggttgacttggaagaacacgagattaggtat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 gaagtgagagggttgaaacctggccatcaggttgacttggaagaacacgagattaggtat 2616
Query: 659 ttatgttccaaggccagatctattttcatcaagcagccaatcctattggaattggaggca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2617 ttatgttccaaggccagatctattttcatcaagcagccaatcctattggaattggaggca 2676
Query: 719 ccaattaagatttgtggtgatatccacggtcaatattatgatttgttacgtcttttcgaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 ccaattaagatttgtggtgatatccacggtcaatattatgatttgttacgtcttttcgaa 2736
Query: 779 tacggtgggktcccaccagaatccaactatctgtttttaggkgattatgttggatcgtgg 838
||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 2737 tacggtgggttcccaccagaatccaactatctgtttttaggtgattatg-tggatcgtgg 2795
Query: 839 taaacaatcgc 849
|||||||||||
Sbjct: 2796 taaacaatcgc 2806
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,069
Number of Sequences: 1807
Number of extensions: 13069
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)